Mini Protein Cheesecakes
These Mini Protein Cheesecakes are not just a delicious treat; they’re also a healthy dessert option packed with over 9 grams of protein per serving! Perfect for any occasion, whether it’s a cozy family gathering or a fitness-focused celebration, these cheesecakes offer a unique twist on the classic dessert. With a buttery graham cracker crust and creamy filling made from Greek yogurt and light cream cheese, you won’t be able to resist their delightful flavor and texture.
Why You’ll Love This Recipe
- High in Protein: Each cheesecake delivers more than 9 grams of protein, making it an excellent choice for post-workout recovery or a nutritious snack.
- Simple Ingredients: With common pantry staples, this recipe is easy to whip up without hunting for specialty items.
- Versatile Toppings: Customize your cheesecakes with fresh fruits or nuts to make them even more delightful.
- Gluten-Free Option: Use gluten-free graham crackers to ensure everyone can enjoy these treats.
- Quick Preparation: In just 30 minutes, these mini cheesecakes are ready to chill while you prepare your favorite toppings.
Tools and Preparation
To make these Mini Protein Cheesecakes, having the right tools will make the process smoother and more efficient. Here’s what you need:
Essential Tools and Equipment
- Food processor
- Cupcake tin
- Electric mixer
- Mixing bowls
- Measuring cups and spoons
Importance of Each Tool
- Food processor: Essential for creating the perfect graham cracker crust by easily grinding the crackers into crumbs.
- Electric mixer: Helps achieve a smooth filling without lumps, ensuring your cheesecake has that rich, creamy texture.

Ingredients
These mini protein cheesecakes are the perfect healthy dessert with over 9 grams of protein per serving! They have a homemade buttery graham cracker crust and are made with Greek yogurt and light cream cheese.
For the Crust
- 1 ½ cups graham cracker crumbs (gluten-free if needed)
- 5 Tbsp salted butter (melted)
For the Filling
- 8 oz cream cheese (room temperature)
- ¾ cup plain 0% Greek yogurt (room temperature)
- ⅓ cup granulated sugar
- 1 egg + 1 yolk
- 1 tsp vanilla extract
- 2 tsp lemon juice
- ¼ – ½ tsp lemon zest (optional)
- 1 Tbsp arrowroot starch or cornstarch
How to Make Mini Protein Cheesecakes
Step 1: Preheat the Oven
Preheat your oven to 350°F (175°C) and line a cupcake tin with 12 liners.
Step 2: Prepare the Crust
- Add graham crackers to a food processor and pulse until they are finely crushed.
- Combine the melted butter with the crushed graham crackers in the food processor and pulse until mixed. Alternatively, place the crackers in a plastic bag, pound them into crumbs using a rolling pin, then mix in a bowl with melted butter.
- Divide the crumb mixture evenly among muffin liners (about 1.5 tablespoons each) and press down firmly to form an even base.
Step 3: Bake the Crust
Bake for about 5-6 minutes until lightly golden. Remove from oven and let cool for 5-10 minutes while preparing the filling.
Step 4: Make the Filling
In a large mixing bowl, beat room temperature cream cheese with an electric mixer until smooth. Add Greek yogurt, egg, egg yolk, sugar, vanilla extract, lemon juice, lemon zest (if using), and arrowroot starch or cornstarch. Mix on low speed until everything is well combined—avoid overbeating.
Step 5: Fill Muffin Liners
Evenly distribute the cheesecake filling into each muffin liner over the cooled crusts.
Step 6: Bake Again
Bake for another 17-20 minutes or until set—there should be no jiggle when gently shaken.
Step 7: Cooling Time
Allow cheesecakes to cool at room temperature for about 30 minutes before transferring them to the refrigerator. Chill for at least 3 hours before serving.
Step 8: Serve and Enjoy!
Top your mini protein cheesecakes with fresh berries and mint leaves before serving for added flavor and presentation! Enjoy every bite!
How to Serve Mini Protein Cheesecakes
These mini protein cheesecakes are not only delicious but also versatile. You can serve them in various ways to enhance their appeal and flavor profile.
Fresh Berries
- Top your cheesecakes with a mix of fresh berries like strawberries, blueberries, and raspberries for a burst of color and flavor.
Mint Leaves
- Add small mint leaves on top for a refreshing touch that complements the creamy texture of the cheesecake.
Whipped Topping
- A dollop of light whipped topping can elevate the dessert, adding extra creaminess and sweetness.
Chocolate Drizzle
- Drizzle some melted dark chocolate over the top for a rich contrast that will satisfy chocolate lovers.
Nut Crust
- Sprinkle crushed nuts like almonds or walnuts on top for an added crunch and nutty flavor.
Fruit Compote
- Serve with a homemade fruit compote made from your favorite fruits cooked down with a little sugar for a sweet sauce.
How to Perfect Mini Protein Cheesecakes
To ensure your mini protein cheesecakes turn out perfectly every time, follow these helpful tips.
-
Use Room Temperature Ingredients: Bringing cream cheese and Greek yogurt to room temperature helps create a smooth filling without lumps.
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Do Not Overbeat: Mix just until combined to prevent the filling from becoming too airy or cracking during baking.
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Cool Gradually: Allow cheesecakes to cool at room temperature before refrigerating to avoid condensation forming on the surface.
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Check for Doneness: The filling should be just set; it shouldn’t jiggle or look wet when you remove them from the oven.
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Chill Thoroughly: Refrigerate for at least 3 hours before serving to allow flavors to meld and achieve the best texture.
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Experiment with Flavors: Feel free to add different extracts or citrus zest for unique variations on this classic recipe.
Best Side Dishes for Mini Protein Cheesecakes
Pairing side dishes with mini protein cheesecakes can enhance your dining experience. Here are some great options:
-
Fruit Salad
A light fruit salad made with seasonal fruits adds freshness and balances the richness of the cheesecake. -
Yogurt Parfait
Layers of Greek yogurt, granola, and fruit create a delightful contrast in textures while keeping it healthy. -
Green Salad
A simple mixed green salad with vinaigrette provides a refreshing counterpoint and cleanses the palate. -
Cheese Plate
Serve alongside a selection of cheeses paired with whole-grain crackers for a savory complement. -
Nut Butter Dips
Offer almond or peanut butter as dips with apple slices or celery sticks for added crunch and protein. -
Smoothie Bowl
Pair with a colorful smoothie bowl topped with granola, seeds, and berries for a nutritious treat.
Common Mistakes to Avoid
Making mini protein cheesecakes can be a rewarding experience, but there are some common pitfalls to watch out for.
- Bold Crust Mistakes: Not letting the crust cool before adding the filling can cause it to become soggy. Always allow it to cool for at least 5-10 minutes.
- Bold Overmixing Batter: Overbeating the filling can lead to cracks during baking. Mix just until smooth on low speed to prevent this.
- Bold Skipping Lemon Juice: Omitting lemon juice can result in a bland flavor. Always include it for that fresh, tangy zest.
- Bold Incorrect Baking Time: Underbaking or overbaking can ruin your cheesecakes. Keep an eye on them in the oven; they should not jiggle when done.
- Bold Ignoring Chilling Time: Cutting into them too early will spoil their texture. Chill for at least 3 hours for the best results.

Storage & Reheating Instructions
Refrigerator Storage
- Store mini protein cheesecakes in an airtight container.
- They can last for up to 5 days in the refrigerator.
Freezing Mini Protein Cheesecakes
- Wrap each cheesecake individually in plastic wrap and then place them in a freezer-safe container.
- They can be frozen for up to 2 months.
Reheating Mini Protein Cheesecakes
- Bold Oven: Preheat your oven to 350°F and bake for about 10 minutes, just until warmed through.
- Bold Microwave: Heat on medium power in short bursts of 15-20 seconds until warm.
- Bold Stovetop: Place in a non-stick skillet over low heat, covering with a lid until warmed through.
Frequently Asked Questions
What are Mini Protein Cheesecakes?
Mini protein cheesecakes are small, individual-sized desserts made with Greek yogurt and cream cheese, providing a healthy twist on traditional cheesecake.
How much protein is in Mini Protein Cheesecakes?
Each serving contains over 9 grams of protein, making them a great option for a nutritious dessert.
Can I customize my Mini Protein Cheesecakes?
Absolutely! You can add different flavors like chocolate or fruit purees, or top them with various fruits and nuts.
Are Mini Protein Cheesecakes gluten-free?
Yes, if you use gluten-free graham crackers, these mini protein cheesecakes can easily be made gluten-free.
Final Thoughts
These mini protein cheesecakes are not only delicious but also versatile and packed with nutrition. You can customize them with various toppings or flavors to fit your taste. Give this recipe a try and enjoy a guilt-free treat that satisfies your sweet tooth!
Mini Protein Cheesecakes
Indulge in the delightful taste of Mini Protein Cheesecakes, a guilt-free dessert that satisfies your sweet cravings while providing a protein boost. Each cheesecake is crafted with a homemade buttery graham cracker crust and a creamy filling made from Greek yogurt and light cream cheese, ensuring you enjoy every bite without compromising on health. Perfect for post-workout recovery or as a nutritious snack, these cheesecakes are versatile and easy to customize with your favorite toppings. Whether you’re hosting a gathering or simply treating yourself, these mini delights will impress everyone at the table!
- Prep Time: 15 minutes
- Cook Time: 25 minutes
- Total Time: 40 minutes
- Yield: Makes approximately 12 servings 1x
- Category: Dessert
- Method: Baking
- Cuisine: American
Ingredients
- 1 ½ cups graham cracker crumbs (gluten-free if needed)
- 5 Tbsp salted butter (melted)
- 8 oz cream cheese (room temperature)
- ¾ cup plain 0% Greek yogurt (room temperature)
- ⅓ cup granulated sugar
- 1 egg + 1 yolk
- 1 tsp vanilla extract
- 2 tsp lemon juice
- 1 Tbsp arrowroot starch or cornstarch
Instructions
- Preheat oven to 350°F (175°C) and line a cupcake tin with liners.
- For the crust, pulse graham crackers in a food processor until finely crushed. Mix with melted butter and press into muffin liners.
- Bake crusts for 5-6 minutes until golden; let cool.
- In a mixing bowl, beat cream cheese until smooth, then add Greek yogurt, sugar, egg, vanilla extract, lemon juice, and starch; mix until combined.
- Distribute filling evenly over cooled crusts and bake for another 17-20 minutes until set.
- Cool at room temperature for 30 minutes before refrigerating for at least 3 hours before serving.
Nutrition
- Serving Size: 1 cheesecake (65g)
- Calories: 130
- Sugar: 7g
- Sodium: 150mg
- Fat: 8g
- Saturated Fat: 5g
- Unsaturated Fat: 3g
- Trans Fat: 0g
- Carbohydrates: 11g
- Fiber: <1g
- Protein: 9g
- Cholesterol: 40mg
